Resource：

For assembly of bacterial genome from metagenomic data, we currently recommend: GitHub...

For taxonomic profiling and assembly, please see results from the 2nd phase of CAMI (doi.org/10.1038/), and Chapter 5 of https://www.elsevier.com/books/investigating-human-diseases-with-the-microbiome/jia/978-0-323-91369-0